Simulation of non-Markovian Processes in BlenX

Prandi, Davide and Priami, Corrado and Romanel, Alessandro (2008) Simulation of non-Markovian Processes in BlenX. UNSPECIFIED. (Unpublished)

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    Abstract

    BlenX is a programming language explicitly designed for modeling biological processes inspired by Beta-binders. The actual framework assumes biochemical interactions being exponentially distributed, i.e., an underlying Markov process is associated with BlenX programs. In this paper we relax this condition by providing formal tools for managing non-Markovian processes within BlenX.

    Item Type: Departmental Technical Report
    Department or Research center: CoSBi (Center for Computational and Systems Biology)
    Subjects: Q Science > QA Mathematics > QA076 Computer software > QA076.7 Programming Languages - Semantics
    Report Number: TR-11-2008
    Repository staff approval on: 01 Dec 2009

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